Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c oxidase, cbb3-type subunit iii | I596_RS11150 | Q8KS19 | Negative | 2748561 - 2749502 | 33060.2 |
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | I596_RS18090 | Not Available | Negative | 2749499 - 2749657 | 5709.92 |
| cytochrome-c oxidase, cbb3-type subunit ii | I596_RS11155 | Not Available | Negative | 2749654 - 2750265 | 22281.0 |
| cytochrome-c oxidase, cbb3-type subunit i | I596_RS11160 | D9IA43 | Negative | 2750276 - 2751700 | 53306.9 |
| ligand-binding sensor domain-containing diguanylate cyclase | I596_RS11165 | Q57N14 | Positive | 2751983 - 2754961 | 106792.0 |
| s1c family serine protease | I596_RS11170 | D0ZY51 | Negative | 2754958 - 2756172 | 41866.5 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | I596_RS11175 | O31214 | Positive | 2756462 - 2757061 | 21625.0 |
| cytochrome bc complex cytochrome b subunit | I596_RS11180 | O31215 | Positive | 2757061 - 2758326 | 48254.4 |
| cytochrome c1 | I596_RS11185 | O31216 | Positive | 2758319 - 2759086 | 28061.5 |
| glutathione s-transferase n-terminal domain-containing protein | I596_RS11190 | P0ACA5 | Positive | 2759282 - 2759914 | 23981.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
