Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | I596_RS11100 | Q9KIV0 | Negative | 2737180 - 2739495 | 84421.3 |
| duf2271 domain-containing protein | I596_RS11105 | Not Available | Negative | 2739701 - 2741167 | 52293.9 |
| ef-hand domain-containing protein | I596_RS11110 | Not Available | Negative | 2741222 - 2742217 | 35403.1 |
| duf4198 domain-containing protein | I596_RS11115 | Not Available | Negative | 2742317 - 2743114 | 27942.2 |
| sulfite exporter taue/safe family protein | I596_RS11120 | Not Available | Negative | 2743264 - 2743992 | 25225.9 |
| cbb3-type cytochrome oxidase assembly protein ccos | I596_RS11125 | Not Available | Negative | 2743989 - 2744168 | 6140.42 |
| heavy metal translocating p-type atpase | I596_RS11130 | Q59207 | Negative | 2744165 - 2746588 | 84585.9 |
| hypothetical protein | I596_RS11135 | Not Available | Negative | 2746608 - 2746829 | 7706.54 |
| cytochrome c oxidase accessory protein ccog | I596_RS11140 | P18396 | Negative | 2746826 - 2748253 | 52618.2 |
| hypothetical protein | I596_RS11145 | Not Available | Negative | 2748250 - 2748564 | 11458.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
