Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycei family protein | I596_RS11050 | Q7N562 | Negative | 2723684 - 2724319 | 23140.4 |
| gtpase | I596_RS11055 | Not Available | Negative | 2724445 - 2725932 | 52858.4 |
| two-component regulator propeller domain-containing protein | I596_RS11060 | Q9HUI3 | Positive | 2726009 - 2729623 | 129419.0 |
| uroporphyrinogen decarboxylase | I596_RS11065 | B8GPU3 | Negative | 2729655 - 2730713 | 38275.1 |
| wgr domain-containing protein | I596_RS11070 | Not Available | Negative | 2730844 - 2731086 | 9329.12 |
| beta-propeller fold lactonase family protein | I596_RS11075 | Not Available | Positive | 2731195 - 2732205 | 34929.9 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | I596_RS11080 | Q8PJR9 | Negative | 2732230 - 2733573 | 49268.3 |
| lytic transglycosylase domain-containing protein | I596_RS11085 | O64046 | Positive | 2733741 - 2734664 | 32047.1 |
| oxygen-independent coproporphyrinogen iii oxidase | I596_RS11090 | P77915 | Positive | 2734738 - 2736162 | 52733.0 |
| helix-turn-helix domain-containing protein | I596_RS11095 | P47200 | Positive | 2736334 - 2737089 | 27819.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
