Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4097 family beta strand repeat-containing protein | I596_RS10950 | Not Available | Positive | 2694877 - 2695785 | 31372.9 |
| peptide chain release factor 3 | I596_RS10955 | B2FR00 | Positive | 2695958 - 2697565 | 59371.3 |
| cupin domain-containing protein | I596_RS10960 | P27431 | Positive | 2697570 - 2698817 | 45285.9 |
| gnat family n-acetyltransferase | I596_RS10965 | O31628 | Positive | 2698814 - 2699770 | 35617.5 |
| s8 family serine peptidase | I596_RS10970 | Q8T9W1 | Negative | 2699899 - 2702910 | 101875.0 |
| sulfotransferase | I596_RS10975 | Not Available | Negative | 2703271 - 2704371 | 41679.8 |
| hypothetical protein | I596_RS10980 | Not Available | Positive | 2704500 - 2704775 | 9807.4 |
| alkaline phosphatase family protein | I596_RS10985 | Not Available | Positive | 2704768 - 2706699 | 68978.1 |
| hypothetical protein | I596_RS10990 | Not Available | Positive | 2706696 - 2707469 | 27459.9 |
| glutaredoxin family protein | I596_RS10995 | Not Available | Negative | 2707492 - 2707725 | 8451.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
