Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix domain-containing protein | I596_RS10900 | Not Available | Positive | 2678546 - 2681020 | 87386.4 |
| fg-gap repeat protein | I596_RS10905 | Not Available | Positive | 2681208 - 2683568 | 82641.1 |
| hypothetical protein | I596_RS10910 | Not Available | Positive | 2683646 - 2686783 | 106737.0 |
| hypothetical protein | I596_RS10915 | Not Available | Positive | 2687206 - 2687595 | 14130.0 |
| acyl-coa dehydrogenase | I596_RS10920 | Q47146 | Negative | 2687641 - 2690112 | 89233.6 |
| alpha/beta fold hydrolase | I596_RS10925 | Not Available | Negative | 2690137 - 2690988 | 30262.0 |
| tetr/acrr family transcriptional regulator | I596_RS10930 | Not Available | Positive | 2691194 - 2691811 | 23172.8 |
| phosphoenolpyruvate carboxykinase (gtp) | I596_RS10935 | Q2IFT1 | Positive | 2691919 - 2693718 | 65343.6 |
| rna polymerase sigma factor | I596_RS10940 | Q06198 | Positive | 2693858 - 2694406 | 20597.5 |
| hypothetical protein | I596_RS10945 | Not Available | Positive | 2694399 - 2694860 | 16439.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
