Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvra | I596_RS10850 | Q8PN26 | Negative | 2666265 - 2669159 | 105754.0 |
| 50s ribosomal protein l21 | I596_RS10855 | B8GQQ1 | Positive | 2669401 - 2669715 | 11566.1 |
| 50s ribosomal protein l27 | I596_RS10860 | B2FTD2 | Positive | 2669729 - 2669989 | 9115.07 |
| obg family gtpase cgta | I596_RS10865 | Q3BW46 | Positive | 2670134 - 2671171 | 37600.9 |
| 30s ribosomal protein s20 | I596_RS10870 | Q4US37 | Negative | 2671256 - 2671519 | 9619.78 |
| murein biosynthesis integral membrane protein murj | I596_RS10875 | O34238 | Positive | 2671757 - 2673367 | 57800.3 |
| bifunctional riboflavin kinase/fad synthetase | I596_RS10880 | P0AG42 | Positive | 2673798 - 2674757 | 34258.1 |
| isoleucine--trna ligase | I596_RS10885 | B2FTJ0 | Positive | 2674754 - 2677639 | 106687.0 |
| Trna-thr | Not Available | Not Available | Positive | 2677764 - 2677839 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2677841 - 2677915 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
