Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m48 family metallopeptidase | I596_RS10455 | Not Available | Negative | 2575740 - 2576633 | 32518.0 |
| formylglycine-generating enzyme family protein | I596_RS10460 | I6Y8I5 | Negative | 2576753 - 2578678 | 68539.7 |
| hypothetical protein | I596_RS10465 | Not Available | Positive | 2578975 - 2579295 | 11534.6 |
| ku protein | I596_RS10470 | A9NBB7 | Positive | 2579463 - 2580377 | 34048.3 |
| duf2188 domain-containing protein | I596_RS10475 | Not Available | Positive | 2580480 - 2580722 | 9047.59 |
| dna ligase d | I596_RS10480 | Q9I1X7 | Positive | 2580959 - 2583448 | 90121.3 |
| hypothetical protein | I596_RS10485 | Not Available | Negative | 2583494 - 2583685 | 6663.14 |
| amidohydrolase family protein | I596_RS10490 | Not Available | Positive | 2584080 - 2585381 | 46767.2 |
| pqq-binding-like beta-propeller repeat protein | I596_RS10495 | Not Available | Negative | 2585449 - 2586795 | 46145.3 |
| duf3772 domain-containing protein | I596_RS10500 | P77338 | Negative | 2587105 - 2589570 | 86982.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
