Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| right-handed parallel beta-helix repeat-containing protein | I596_RS10355 | Not Available | Positive | 2551022 - 2553463 | 83246.2 |
| rna polymerase sigma factor | I596_RS10360 | Not Available | Positive | 2553593 - 2554150 | 20337.1 |
| serine/threonine protein kinase | I596_RS10365 | Q7U095 | Positive | 2554143 - 2555735 | 56170.2 |
| chat domain-containing tetratricopeptide repeat protein | I596_RS10370 | Not Available | Positive | 2556106 - 2559192 | 108969.0 |
| glutaminyl-peptide cyclotransferase | I596_RS10375 | Q84WV9 | Negative | 2559253 - 2560086 | 30850.0 |
| transglutaminase domain-containing protein | I596_RS10380 | Not Available | Positive | 2560211 - 2561644 | 50595.4 |
| spfh domain-containing protein | I596_RS10385 | Not Available | Positive | 2561769 - 2562635 | 31615.2 |
| hypothetical protein | I596_RS10390 | Not Available | Positive | 2562661 - 2562858 | 7296.72 |
| duf4177 domain-containing protein | I596_RS10395 | Not Available | Positive | 2562874 - 2563059 | 7131.87 |
| alpha/beta fold hydrolase | I596_RS10400 | Q9WYH1 | Positive | 2563084 - 2564454 | 48757.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
