Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1302 family protein | I596_RS10305 | Not Available | Negative | 2538634 - 2540307 | 62461.0 |
| rnd family transporter | I596_RS10310 | Not Available | Negative | 2540304 - 2542709 | 87311.6 |
| ycf48-related protein | I596_RS10315 | Not Available | Negative | 2542706 - 2543695 | 35121.3 |
| hydroxymethylglutaryl-coa lyase | I596_RS10320 | P13703 | Negative | 2543688 - 2544617 | 32367.0 |
| caib/baif coa-transferase family protein | I596_RS10325 | Q7CXU0 | Negative | 2544614 - 2545810 | 42813.6 |
| nuclear transport factor 2 family protein | I596_RS10330 | Not Available | Negative | 2545850 - 2546239 | 14919.5 |
| aspartate/glutamate racemase family protein | I596_RS10335 | Q9F466 | Negative | 2546280 - 2547026 | 26833.7 |
| duf6766 family protein | I596_RS10340 | Not Available | Negative | 2547390 - 2548046 | 24169.7 |
| choice-of-anchor q domain-containing protein | I596_RS10345 | Not Available | Positive | 2548266 - 2549300 | 34526.8 |
| hypothetical protein | I596_RS10350 | Not Available | Positive | 2549390 - 2550934 | 51383.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
