Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane glutamic endopeptidase | I596_RS10255 | Not Available | Negative | 2526130 - 2526927 | 28006.0 |
| m48 family metallopeptidase | I596_RS10260 | P43674 | Positive | 2527278 - 2528030 | 26264.4 |
| sigma 54-interacting transcriptional regulator | I596_RS10265 | P77743 | Negative | 2528221 - 2530074 | 69004.9 |
| 3-isopropylmalate dehydratase small subunit | I596_RS10270 | Q3SHL2 | Negative | 2530160 - 2530804 | 24323.8 |
| 3-isopropylmalate dehydratase large subunit | I596_RS10275 | B7H0T7 | Negative | 2530806 - 2532218 | 50600.6 |
| isopropylmalate isomerase | I596_RS10280 | Not Available | Negative | 2532409 - 2532816 | 14552.1 |
| isochorismatase family protein | I596_RS10285 | Q88FY5 | Negative | 2532767 - 2533375 | 21336.7 |
| hydantoinase b/oxoprolinase family protein | I596_RS10290 | Q58373 | Negative | 2533372 - 2535225 | 67344.4 |
| hydantoinase/oxoprolinase family protein | I596_RS10295 | Q01262 | Negative | 2535231 - 2537297 | 72792.0 |
| duf1329 domain-containing protein | I596_RS10300 | Not Available | Negative | 2537366 - 2538619 | 47101.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
