Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine-protein kinase | I596_RS00995 | Not Available | Negative | 260991 - 263714 | 97179.5 |
| ecf-type sigma factor | I596_RS01000 | Not Available | Negative | 263773 - 264348 | 20916.1 |
| hypothetical protein | I596_RS01005 | Not Available | Negative | 264562 - 265947 | 48171.8 |
| formate dehydrogenase accessory sulfurtransferase fdhd | I596_RS01010 | Q3BS67 | Positive | 266188 - 267021 | 28728.4 |
| formate dehydrogenase subunit delta | I596_RS01015 | Not Available | Positive | 267028 - 267261 | 8519.18 |
| ompp1/fadl family transporter | I596_RS01020 | P43838 | Positive | 267411 - 268739 | 46905.1 |
| hypothetical protein | I596_RS01025 | Not Available | Negative | 268697 - 269188 | 16851.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | I596_RS01030 | Q7CQE0 | Negative | 269260 - 269952 | 23511.6 |
| phosphatidate cytidylyltransferase | I596_RS01035 | P76091 | Positive | 270037 - 270993 | 34998.0 |
| lysophospholipid acyltransferase family protein | I596_RS01040 | Not Available | Positive | 270993 - 271634 | 23716.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
