Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylornithine carbamoyltransferase | I596_RS10160 | Q8P8J2 | Negative | 2487322 - 2488332 | 37553.9 |
| Trna-ala | Not Available | Not Available | Positive | 2488713 - 2488788 | Not Available |
| amidohydrolase family protein | I596_RS10170 | Not Available | Negative | 2489061 - 2489882 | 29490.6 |
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS18970 | Not Available | Negative | 2490071 - 2490267 | 7037.32 |
| duf6923 family protein | I596_RS10175 | Not Available | Negative | 2490554 - 2498527 | 260307.0 |
| ecf-type sigma factor | I596_RS10180 | Not Available | Positive | 2498900 - 2499499 | 22328.7 |
| serine/threonine-protein kinase | I596_RS10185 | O34507 | Positive | 2499903 - 2502617 | 98764.4 |
| choice-of-anchor j domain-containing protein | I596_RS10190 | Not Available | Positive | 2502871 - 2505075 | 73928.8 |
| duf1615 domain-containing protein | I596_RS10195 | P77562 | Positive | 2505682 - 2506740 | 38699.4 |
| duf1428 domain-containing protein | I596_RS10200 | Not Available | Positive | 2507101 - 2507469 | 13678.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
