Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp2c family serine/threonine-protein phosphatase | I596_RS10110 | O34779 | Positive | 2477937 - 2478641 | 25637.2 |
| pig-l deacetylase family protein | I596_RS10115 | Not Available | Negative | 2478648 - 2479658 | 35856.4 |
| argininosuccinate lyase | I596_RS10120 | B4SQ92 | Negative | 2479662 - 2480948 | 46353.4 |
| n-acetyl-gamma-glutamyl-phosphate reductase | I596_RS10125 | Q8PK31 | Negative | 2481007 - 2481957 | 33614.3 |
| gnat family n-acetyltransferase | I596_RS10130 | Not Available | Negative | 2481954 - 2482550 | 22201.5 |
| acetylglutamate kinase | I596_RS10135 | Q8P8J6 | Negative | 2482555 - 2483871 | 48747.5 |
| acetylornithine deacetylase | I596_RS10140 | Q8P8J5 | Negative | 2483858 - 2484958 | 38731.6 |
| argininosuccinate synthase | I596_RS10145 | Q8P8J4 | Negative | 2485001 - 2486203 | 43278.4 |
| osmc family protein | I596_RS10150 | Not Available | Negative | 2486226 - 2486693 | 16516.6 |
| fmn-binding negative transcriptional regulator | I596_RS10155 | P0C154 | Negative | 2486690 - 2487313 | 22960.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
