Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone deacetylase family protein | I596_RS10060 | Q941D6 | Positive | 2465723 - 2466646 | 32831.8 |
| homoserine o-acetyltransferase | I596_RS10065 | H8L374 | Positive | 2466740 - 2467840 | 39897.2 |
| cysteine dioxygenase family protein | I596_RS10070 | Not Available | Positive | 2467873 - 2468451 | 21832.7 |
| tetr/acrr family transcriptional regulator | I596_RS10075 | Not Available | Negative | 2468918 - 2469634 | 25349.9 |
| hlyd family efflux transporter periplasmic adaptor subunit | I596_RS10080 | Q9L9D4 | Positive | 2469729 - 2470736 | 36228.1 |
| atp-binding cassette domain-containing protein | I596_RS10085 | P0A9U1 | Positive | 2470736 - 2472523 | 63702.0 |
| abc transporter permease | I596_RS10090 | P0AFQ4 | Positive | 2472520 - 2473650 | 40641.8 |
| abc transporter permease | I596_RS10095 | P0AFQ0 | Positive | 2473656 - 2474774 | 39916.9 |
| efflux transporter outer membrane subunit | I596_RS10100 | Q51397 | Positive | 2474789 - 2476303 | 53596.0 |
| enoyl-acp reductase fabv | I596_RS10105 | Q4V0G3 | Positive | 2476386 - 2477603 | 44688.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
