Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | I596_RS10010 | Q3BSF8 | Negative | 2455087 - 2455791 | 24924.1 |
| trz/atz family hydrolase | I596_RS10015 | C5BSJ0 | Negative | 2455872 - 2457191 | 47654.2 |
| elongation factor p | I596_RS10020 | B2I707 | Negative | 2457345 - 2457911 | 20516.4 |
| ef-p beta-lysylation protein epmb | I596_RS10025 | P44641 | Positive | 2458014 - 2459018 | 36395.8 |
| eal domain-containing protein | I596_RS10030 | Not Available | Positive | 2459144 - 2461216 | 76547.2 |
| yhgn family naat transporter | I596_RS10035 | P67144 | Negative | 2461242 - 2461844 | 21251.1 |
| ubih/ubif/visc/coq6 family ubiquinone biosynthesis hydroxylase | I596_RS10040 | P75728 | Negative | 2461869 - 2463050 | 41489.9 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | I596_RS10045 | P25534 | Negative | 2463047 - 2464258 | 43045.8 |
| hypothetical protein | I596_RS10050 | Not Available | Positive | 2464524 - 2465117 | 21331.1 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | I596_RS10055 | Q1LJ80 | Positive | 2465134 - 2465688 | 20018.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
