Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp endopeptidase proteolytic subunit clpp | I596_RS09960 | Q8PNI5 | Negative | 2449087 - 2449719 | 23043.7 |
| trigger factor | I596_RS09965 | Q3BWQ2 | Negative | 2449745 - 2451022 | 46744.6 |
| Trna-leu | Not Available | Not Available | Positive | 2451190 - 2451274 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 2451305 - 2451380 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 2451452 - 2451528 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2451619 - 2451695 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 2451716 - 2451792 | Not Available |
| fad/nad(p)-binding protein | I596_RS09995 | Not Available | Negative | 2451968 - 2453410 | 51453.0 |
| hypothetical protein | I596_RS10000 | Not Available | Negative | 2453610 - 2454422 | 28543.4 |
| phosphoglycolate phosphatase | I596_RS10005 | Q4UVL3 | Negative | 2454419 - 2455090 | 23231.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
