Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | I596_RS09910 | P03007 | Negative | 2437894 - 2438598 | 25464.4 |
| ribonuclease hi | I596_RS09915 | Q2P6Y2 | Negative | 2438595 - 2439047 | 16777.8 |
| methyltransferase domain-containing protein | I596_RS09920 | Not Available | Negative | 2439062 - 2439748 | 25103.3 |
| hydroxyacylglutathione hydrolase | I596_RS09925 | Q3BWP5 | Positive | 2439887 - 2440654 | 27180.3 |
| transglycosylase slt domain-containing protein | I596_RS09930 | P0AEZ8 | Positive | 2440651 - 2441985 | 47682.0 |
| sura n-terminal domain-containing protein | I596_RS09935 | P0ADY2 | Negative | 2442170 - 2444086 | 69870.3 |
| Trna-val | Not Available | Not Available | Positive | 2444239 - 2444313 | Not Available |
| hu family dna-binding protein | I596_RS09945 | P0A3H2 | Negative | 2444326 - 2444598 | 9392.4 |
| endopeptidase la | I596_RS09950 | Q5H432 | Negative | 2445076 - 2447580 | 91995.3 |
| atp-dependent clp protease atp-binding subunit clpx | I596_RS09955 | Q8PNI4 | Negative | 2447698 - 2448975 | 47216.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
