Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I596_RS09860 | Not Available | Positive | 2420645 - 2421280 | 23674.3 |
| sorbosone dehydrogenase family protein | I596_RS09865 | Not Available | Positive | 2421435 - 2423141 | 60169.7 |
| nupc/nupg family nucleoside cnt transporter | I596_RS09870 | P44742 | Negative | 2423166 - 2424476 | 46283.6 |
| glutamate synthase large subunit | I596_RS09875 | E1V8I1 | Positive | 2424712 - 2429178 | 159464.0 |
| fad-dependent oxidoreductase | I596_RS09880 | E1V8I0 | Positive | 2429175 - 2430599 | 50845.0 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | I596_RS09885 | P73138 | Positive | 2430917 - 2432029 | 39115.4 |
| s-(hydroxymethyl)glutathione synthase | I596_RS09890 | Q51669 | Positive | 2432135 - 2432707 | 20111.1 |
| response regulator transcription factor | I596_RS09895 | Q7WZY4 | Positive | 2433056 - 2433709 | 23664.6 |
| atp-binding protein | I596_RS09900 | P09835 | Negative | 2433843 - 2435219 | 50425.3 |
| tonb-dependent receptor | I596_RS09905 | Not Available | Positive | 2435355 - 2437838 | 90781.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
