Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf58 domain-containing protein | I596_RS09810 | P9WLX4 | Negative | 2406694 - 2407611 | 33238.1 |
| moxr family atpase | I596_RS09815 | Not Available | Negative | 2407740 - 2408726 | 36035.4 |
| eal domain-containing protein | I596_RS09820 | P55552 | Negative | 2408829 - 2409983 | 42335.0 |
| hypothetical protein | I596_RS09825 | Not Available | Negative | 2410179 - 2412458 | 75363.3 |
| type iv pilus secretin pilq | I596_RS09830 | P34750 | Negative | 2412530 - 2414803 | 80373.0 |
| pilus assembly protein pilp | I596_RS09835 | G3XCX7 | Negative | 2414826 - 2415359 | 19137.7 |
| type 4a pilus biogenesis protein pilo | I596_RS09840 | G3XD51 | Negative | 2415361 - 2416083 | 26226.9 |
| piln domain-containing protein | I596_RS09845 | G3XD30 | Negative | 2416080 - 2416844 | 27736.3 |
| pilus assembly protein pilm | I596_RS09850 | G3XD28 | Negative | 2416844 - 2417902 | 37805.6 |
| penicillin-binding protein 1a | I596_RS09855 | Q87AW7 | Positive | 2418140 - 2420617 | 89735.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
