Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan dd-metalloendopeptidase family protein | I596_RS09760 | P45682 | Negative | 2396103 - 2397014 | 30881.9 |
| yqaa family protein | I596_RS09765 | P44832 | Negative | 2397033 - 2397638 | 22331.2 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | I596_RS09770 | Q3BUS3 | Negative | 2397635 - 2398267 | 22964.8 |
| 5'/3'-nucleotidase sure | I596_RS09775 | Q3BUS4 | Negative | 2398323 - 2399099 | 27437.5 |
| smr/muts family protein | I596_RS09780 | Not Available | Positive | 2399364 - 2399909 | 20040.4 |
| hypothetical protein | I596_RS09785 | Not Available | Positive | 2399918 - 2401618 | 58670.3 |
| batd family protein | I596_RS09790 | Not Available | Negative | 2401635 - 2403332 | 60614.2 |
| vwa domain-containing protein | I596_RS09795 | Not Available | Negative | 2403329 - 2405233 | 65933.2 |
| vwa domain-containing protein | I596_RS09800 | Not Available | Negative | 2405230 - 2406234 | 35932.7 |
| duf4381 domain-containing protein | I596_RS09805 | Not Available | Negative | 2406227 - 2406697 | 17455.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
