Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I596_RS00945 | Not Available | Negative | 247176 - 247820 | 23119.7 |
| pd40 domain-containing protein | I596_RS00950 | Not Available | Positive | 248278 - 249597 | 45595.1 |
| thioredoxin trxc | I596_RS00955 | P0AGG6 | Negative | 249762 - 250214 | 16142.6 |
| serine/threonine-protein kinase | I596_RS00960 | P54736 | Negative | 250270 - 252519 | 79529.8 |
| ecf-type sigma factor | I596_RS18655 | Not Available | Negative | 252516 - 253085 | 21435.6 |
| choice-of-anchor j domain-containing protein | I596_RS00970 | Not Available | Negative | 253104 - 254495 | 48820.5 |
| substrate-binding domain-containing protein | I596_RS00975 | Not Available | Negative | 254593 - 255660 | 38457.7 |
| formate dehydrogenase subunit gamma | I596_RS00980 | Not Available | Positive | 255904 - 256416 | 17956.8 |
| nadh-quinone oxidoreductase subunit nuof | I596_RS00985 | Q46507 | Positive | 256413 - 257981 | 55591.7 |
| formate dehydrogenase subunit alpha | I596_RS00990 | O34720 | Positive | 258030 - 260975 | 106745.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
