Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidative damage protection protein | I596_RS09710 | A9C3G0 | Positive | 2385720 - 2385986 | 10017.1 |
| peptide deformylase | I596_RS09715 | Q886I1 | Positive | 2386009 - 2386545 | 19453.3 |
| duf6491 family protein | I596_RS09720 | Not Available | Negative | 2386550 - 2386963 | 15516.5 |
| s41 family peptidase | I596_RS09725 | Q9RDE2 | Positive | 2387168 - 2390440 | 119446.0 |
| dihydropteroate synthase | I596_RS09730 | P0AC14 | Negative | 2390624 - 2391520 | 31157.6 |
| atp-dependent zinc metalloprotease ftsh | I596_RS09735 | Q6LUJ8 | Negative | 2391632 - 2393560 | 70219.6 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | I596_RS09740 | Q8PLQ8 | Negative | 2393666 - 2394283 | 22790.4 |
| ribosome assembly rna-binding protein yhby | I596_RS09745 | P71376 | Positive | 2394371 - 2394664 | 10689.1 |
| mth938-like domain-containing protein | I596_RS09750 | Not Available | Positive | 2394690 - 2395064 | 13388.4 |
| rna polymerase sigma factor rpod/siga | I596_RS09755 | P13445 | Negative | 2395212 - 2396093 | 32913.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
