Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | I596_RS09610 | Not Available | Negative | 2363251 - 2364198 | 33929.5 |
| m20 family metallopeptidase | I596_RS09615 | Not Available | Negative | 2364203 - 2365681 | 52987.5 |
| comea family dna-binding protein | I596_RS09620 | Not Available | Positive | 2365938 - 2366237 | 9993.91 |
| set domain-containing protein | I596_RS09625 | Not Available | Positive | 2366384 - 2366845 | 16988.0 |
| gnat family n-acetyltransferase | I596_RS09630 | Q7VG78 | Positive | 2366859 - 2367383 | 19496.3 |
| hutd family protein | I596_RS09635 | P24696 | Positive | 2367416 - 2368033 | 22608.0 |
| 2og-fe(ii) oxygenase | I596_RS09640 | Not Available | Positive | 2368030 - 2368974 | 35988.3 |
| duf962 domain-containing protein | I596_RS09645 | Not Available | Positive | 2369193 - 2369657 | 17401.7 |
| rnd family transporter | I596_RS09650 | Not Available | Negative | 2370046 - 2372553 | 91598.7 |
| ycf48-related protein | I596_RS18765 | Not Available | Negative | 2372550 - 2373674 | 38788.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
