Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | I596_RS09560 | Q8FCI8 | Positive | 2350373 - 2353534 | 112731.0 |
| hypothetical protein | I596_RS09565 | Not Available | Negative | 2353930 - 2355045 | 40736.6 |
| helix-turn-helix transcriptional regulator | I596_RS09570 | O27383 | Negative | 2355264 - 2355476 | 7904.58 |
| hypothetical protein | I596_RS09575 | Not Available | Negative | 2355473 - 2356093 | 21920.1 |
| thioredoxin | I596_RS09580 | P10472 | Positive | 2356266 - 2357144 | 31551.3 |
| duf4442 domain-containing protein | I596_RS09585 | Not Available | Positive | 2357272 - 2357727 | 17391.4 |
| aaa family atpase | I596_RS09590 | Not Available | Negative | 2357734 - 2358324 | 21328.8 |
| queuosine precursor transporter | I596_RS09595 | Not Available | Positive | 2358449 - 2359237 | 28691.0 |
| m13 family metallopeptidase | I596_RS09600 | Q4PZA2 | Positive | 2359563 - 2361677 | 77659.8 |
| hypothetical protein | I596_RS09605 | Not Available | Positive | 2362108 - 2363166 | 36511.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
