Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhaa | I596_RS09510 | Q92Y37 | Positive | 2339628 - 2340911 | 44891.1 |
| succinate--coa ligase subunit alpha | I596_RS09515 | P53591 | Negative | 2341050 - 2341919 | 29717.1 |
| adp-forming succinate--coa ligase subunit beta | I596_RS09520 | Q9PAH1 | Negative | 2341934 - 2343100 | 40717.0 |
| pas domain-containing sensor histidine kinase | I596_RS09525 | P33639 | Positive | 2343353 - 2344963 | 58585.0 |
| xaa-pro dipeptidase | I596_RS09530 | Q8PH57 | Positive | 2345045 - 2346382 | 49467.6 |
| dnaj c-terminal domain-containing protein | I596_RS09535 | A9KE65 | Negative | 2346401 - 2347300 | 32696.6 |
| hsp20/alpha crystallin family protein | I596_RS09540 | P46516 | Negative | 2347385 - 2347828 | 16748.7 |
| peroxiredoxin | I596_RS09545 | Q69TY4 | Positive | 2347986 - 2348465 | 16913.5 |
| tetr/acrr family transcriptional regulator | I596_RS09550 | Not Available | Positive | 2348592 - 2349218 | 22983.5 |
| efflux rnd transporter periplasmic adaptor subunit | I596_RS09555 | P0AE07 | Positive | 2349215 - 2350363 | 39989.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
