Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | I596_RS09415 | Not Available | Positive | 2311553 - 2313277 | 61818.1 |
| two-component regulator propeller domain-containing protein | I596_RS09420 | Not Available | Negative | 2313294 - 2315723 | 86766.7 |
| exodeoxyribonuclease v subunit alpha | I596_RS09425 | P9WHJ0 | Negative | 2315783 - 2317516 | 60628.4 |
| uvrd-helicase domain-containing protein | I596_RS09430 | P08394 | Negative | 2317513 - 2321208 | 133177.0 |
| exodeoxyribonuclease v subunit gamma | I596_RS09435 | P07648 | Negative | 2321205 - 2324609 | 123376.0 |
| helix-turn-helix transcriptional regulator | I596_RS09440 | Not Available | Negative | 2324689 - 2325018 | 11371.8 |
| duf1801 domain-containing protein | I596_RS09445 | Not Available | Negative | 2325121 - 2325522 | 14516.6 |
| srpbcc domain-containing protein | I596_RS09450 | Not Available | Negative | 2325646 - 2326143 | 18404.2 |
| helix-turn-helix transcriptional regulator | I596_RS09455 | O53478 | Negative | 2326147 - 2326560 | 15369.7 |
| ntp/ndp exchange transporter | I596_RS09460 | Not Available | Negative | 2326695 - 2328068 | 48922.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
