Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolyl oligopeptidase family serine peptidase | I596_RS09365 | B2RJX3 | Negative | 2300149 - 2302698 | 93252.6 |
| tetratricopeptide repeat protein | I596_RS09370 | Not Available | Positive | 2303052 - 2305457 | 85031.7 |
| hypothetical protein | I596_RS09375 | Not Available | Positive | 2305679 - 2306152 | 17211.0 |
| pirin family protein | I596_RS09380 | P73623 | Negative | 2306348 - 2307052 | 25686.4 |
| lipid a 3-o-deacylase | I596_RS09385 | Not Available | Negative | 2307193 - 2307810 | 22049.2 |
| sdr family nad(p)-dependent oxidoreductase | I596_RS09390 | Q5P5I4 | Positive | 2307986 - 2308675 | 23053.7 |
| type b 50s ribosomal protein l36 | I596_RS09395 | B4SSV0 | Positive | 2308764 - 2308889 | 4872.19 |
| hypothetical protein | I596_RS09400 | Not Available | Positive | 2309075 - 2309380 | 11344.7 |
| agmatine/peptidylarginine deiminase | I596_RS09405 | Q9I6J9 | Positive | 2309382 - 2310422 | 37625.4 |
| universal stress protein | I596_RS09410 | Not Available | Negative | 2310461 - 2311288 | 29827.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
