Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine--trna ligase | I596_RS09315 | B2FPR7 | Negative | 2288690 - 2291404 | 100596.0 |
| serine protease | I596_RS09320 | Not Available | Positive | 2291786 - 2294050 | 80370.7 |
| methionine abc transporter atp-binding protein | I596_RS09325 | Q3BNZ3 | Positive | 2294225 - 2295226 | 35797.1 |
| methionine abc transporter permease | I596_RS09330 | Q9KTJ6 | Positive | 2295226 - 2295891 | 23137.4 |
| metq/nlpa family abc transporter substrate-binding protein | I596_RS09335 | Q9CK95 | Positive | 2295982 - 2296755 | 27480.3 |
| phasin family protein | I596_RS09340 | Not Available | Positive | 2297055 - 2297558 | 17784.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | I596_RS09345 | Q4UWK2 | Negative | 2297596 - 2298066 | 17090.9 |
| ribosome silencing factor | I596_RS09350 | Q02SH2 | Negative | 2298077 - 2298415 | 12188.7 |
| glutathione peroxidase | I596_RS09355 | P06610 | Positive | 2299074 - 2299625 | 19955.7 |
| marr family winged helix-turn-helix transcriptional regulator | I596_RS09360 | O34777 | Positive | 2299672 - 2300136 | 16706.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
