Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase-n subunit alpha | I596_RS09260 | P32176 | Negative | 2278610 - 2281678 | 112092.0 |
| duf411 domain-containing protein | I596_RS09270 | Not Available | Negative | 2282012 - 2282518 | 17460.8 |
| nuclear transport factor 2 family protein | I596_RS09275 | Not Available | Negative | 2282530 - 2283039 | 17973.4 |
| cytochrome c | I596_RS09280 | Not Available | Negative | 2283036 - 2283734 | 24024.2 |
| copl family metal-binding regulatory protein | I596_RS09285 | Not Available | Negative | 2283947 - 2284360 | 13232.1 |
| giy-yig nuclease family protein | I596_RS09290 | Not Available | Positive | 2284701 - 2285414 | 26566.8 |
| nicotinate-nucleotide adenylyltransferase | I596_RS09295 | A1WYZ3 | Negative | 2285441 - 2286076 | 23226.0 |
| dna polymerase iii subunit delta | I596_RS09300 | Not Available | Negative | 2286076 - 2287098 | 37260.6 |
| lps assembly lipoprotein lpte | I596_RS09305 | Not Available | Negative | 2287115 - 2287615 | 17748.6 |
| aminoglycoside phosphotransferase family protein | I596_RS09310 | P18622 | Negative | 2287731 - 2288687 | 34402.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
