Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I596_RS09215 | Not Available | Negative | 2268435 - 2268800 | 13090.9 |
| methionyl-trna formyltransferase-like protein | I596_RS18470 | Not Available | Positive | 2269391 - 2269906 | 20029.3 |
| calcium:proton antiporter | I596_RS09220 | P55471 | Positive | 2270220 - 2271311 | 37499.9 |
| selenide, water dikinase seld | I596_RS09225 | B1Z181 | Negative | 2271328 - 2272383 | 35925.4 |
| Trna-sec | Not Available | Not Available | Positive | 2272546 - 2272641 | Not Available |
| selenocysteine-specific translation elongation factor | I596_RS09235 | P14081 | Negative | 2272682 - 2274604 | 68414.3 |
| l-seryl-trna(sec) selenium transferase | I596_RS09240 | Q02FL3 | Negative | 2274601 - 2276013 | 49621.4 |
| formate dehydrogenase accessory protein fdhe | I596_RS09245 | A7ML45 | Negative | 2276020 - 2276982 | 34076.7 |
| formate dehydrogenase subunit gamma | I596_RS09250 | P0AEL2 | Negative | 2277058 - 2277702 | 24591.6 |
| formate dehydrogenase subunit beta | I596_RS09255 | P0AAJ3 | Negative | 2277699 - 2278601 | 32603.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
