Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | I596_RS09165 | Q8PLQ5 | Positive | 2258406 - 2259353 | 34955.2 |
| rna chaperone hfq | I596_RS09170 | Q9PH57 | Positive | 2259481 - 2259741 | 9431.33 |
| ribosome rescue gtpase hflx | I596_RS09175 | P25519 | Positive | 2259762 - 2261099 | 48633.4 |
| ftsh protease activity modulator hflk | I596_RS09180 | Q9KV09 | Positive | 2261199 - 2262311 | 40454.6 |
| protease modulator hflc | I596_RS09185 | P44545 | Positive | 2262313 - 2263173 | 32169.7 |
| duf2065 family protein | I596_RS09190 | Not Available | Positive | 2263179 - 2263367 | 6687.59 |
| adenylosuccinate synthase | I596_RS09195 | Q4URT6 | Positive | 2263531 - 2264823 | 46309.6 |
| m13 family metallopeptidase | I596_RS09200 | B2RQR8 | Positive | 2264952 - 2267069 | 76842.5 |
| Trna-leu | Not Available | Not Available | Positive | 2267175 - 2267259 | Not Available |
| osmc family protein | I596_RS09210 | P0C0L2 | Positive | 2267927 - 2268355 | 14706.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
