Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase subunit beta | I596_RS09115 | B2SVN7 | Positive | 2245493 - 2246707 | 43046.5 |
| tryptophan synthase subunit alpha | I596_RS09120 | B2I9J3 | Positive | 2246704 - 2247519 | 27751.2 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | I596_RS09125 | Q4UWC9 | Positive | 2247585 - 2248451 | 31578.6 |
| rna polymerase-associated protein rapa | I596_RS09130 | A0KGL5 | Negative | 2248478 - 2251306 | 103633.0 |
| (2e,6e)-farnesyl diphosphate synthase | I596_RS09135 | P22939 | Negative | 2251424 - 2252317 | 31077.4 |
| exodeoxyribonuclease vii small subunit | I596_RS09140 | B4SQZ7 | Negative | 2252318 - 2252572 | 9222.66 |
| trna lysidine(34) synthetase tils | I596_RS09145 | Q8PIY5 | Negative | 2252604 - 2253908 | 47688.3 |
| l-threonine 3-dehydrogenase | I596_RS09150 | Q2NZP2 | Negative | 2254046 - 2255068 | 37302.4 |
| hypothetical protein | I596_RS09155 | Not Available | Positive | 2255361 - 2256062 | 23050.1 |
| s46 family peptidase | I596_RS09160 | V5YM14 | Positive | 2256216 - 2258378 | 78832.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
