Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fe-s cluster assembly protein suft | I596_RS09015 | P70949 | Positive | 2219204 - 2219761 | 20265.2 |
| hypothetical protein | I596_RS09020 | Not Available | Positive | 2219799 - 2220221 | 15557.2 |
| ump kinase | I596_RS09025 | Q4USQ8 | Negative | 2220267 - 2220992 | 26151.0 |
| translation elongation factor ts | I596_RS09030 | B0RW66 | Negative | 2221156 - 2222037 | 30915.3 |
| 30s ribosomal protein s2 | I596_RS09035 | B2FIA9 | Negative | 2222189 - 2223070 | 32123.6 |
| type i methionyl aminopeptidase | I596_RS09040 | P0AE20 | Positive | 2223372 - 2224139 | 28070.8 |
| [protein-pii] uridylyltransferase | I596_RS09045 | Q4USS0 | Positive | 2224147 - 2226819 | 98608.3 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | I596_RS09050 | Q87F51 | Positive | 2226861 - 2227679 | 28875.7 |
| spx/mgsr family rna polymerase-binding regulatory protein | I596_RS09055 | Not Available | Positive | 2227679 - 2228038 | 13271.0 |
| succinyl-diaminopimelate desuccinylase | I596_RS09060 | Q2P492 | Positive | 2228035 - 2229171 | 39996.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
