Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | I596_RS08965 | Q8KP10 | Negative | 2209115 - 2209657 | 19819.5 |
| hypothetical protein | I596_RS08970 | Not Available | Positive | 2209780 - 2211315 | 55791.0 |
| 5'-3' exonuclease h3th domain-containing protein | I596_RS08975 | Q9S1G2 | Negative | 2211354 - 2212265 | 33480.8 |
| nitroreductase | I596_RS08980 | Not Available | Negative | 2212270 - 2212836 | 20375.8 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | I596_RS08985 | Q2RSB2 | Positive | 2212950 - 2214083 | 39464.5 |
| nad(p) transhydrogenase subunit alpha | I596_RS08990 | P51995 | Positive | 2214080 - 2214373 | 10285.9 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | I596_RS08995 | Q2RSB4 | Positive | 2214437 - 2215846 | 49012.6 |
| acyltransferase | I596_RS09000 | Not Available | Positive | 2215860 - 2216972 | 41357.4 |
| hypothetical protein | I596_RS09005 | Not Available | Negative | 2216979 - 2217407 | 14841.7 |
| plp-dependent aminotransferase family protein | I596_RS09010 | P49309 | Positive | 2217548 - 2219056 | 53803.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
