Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p-like protein yeip | I596_RS08875 | Q4UU61 | Negative | 2190488 - 2191051 | 20509.1 |
| sdr family nad(p)-dependent oxidoreductase | I596_RS08880 | P9WGQ6 | Negative | 2191080 - 2191850 | 26446.9 |
| cyanophycinase | I596_RS08885 | Not Available | Negative | 2192007 - 2192819 | 27811.7 |
| hydroxymethylglutaryl-coa lyase | I596_RS08890 | P35915 | Negative | 2192877 - 2193779 | 31905.1 |
| biotin carboxylase n-terminal domain-containing protein | I596_RS08895 | Q54KE6 | Negative | 2193790 - 2195787 | 71680.8 |
| voc family protein | I596_RS08900 | Not Available | Negative | 2195802 - 2196191 | 13471.7 |
| enoyl-coa hydratase-related protein | I596_RS08905 | Q0AVM1 | Negative | 2196194 - 2196988 | 27584.1 |
| imelysin family protein | I596_RS08910 | Not Available | Positive | 2197203 - 2198480 | 45623.0 |
| di-heme oxidoredictase family protein | I596_RS08915 | Not Available | Positive | 2198483 - 2200027 | 55254.9 |
| imelysin family protein | I596_RS08920 | Not Available | Positive | 2200024 - 2201112 | 37968.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
