Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c13 family peptidase | I596_RS08825 | Not Available | Negative | 2180965 - 2182389 | 50378.4 |
| acireductone synthase | I596_RS08830 | Q4UU49 | Negative | 2182386 - 2183075 | 25327.9 |
| hypothetical protein | I596_RS08835 | Not Available | Positive | 2183231 - 2183518 | 9778.89 |
| hypothetical protein | I596_RS08840 | Not Available | Positive | 2183515 - 2183832 | 10719.9 |
| acireductone dioxygenase | I596_RS08845 | Q02KH4 | Negative | 2183884 - 2184447 | 20700.2 |
| methylthioribulose 1-phosphate dehydratase | I596_RS08850 | B4STR2 | Negative | 2184444 - 2185052 | 22396.5 |
| dna recombination protein rmuc | I596_RS08855 | Q9I4U3 | Positive | 2185283 - 2186878 | 58096.5 |
| amino acid permease | I596_RS08860 | P0AAF0 | Negative | 2186851 - 2188137 | 44320.2 |
| amino acid permease | I596_RS08865 | O07576 | Negative | 2188214 - 2189683 | 51675.1 |
| nudix hydrolase | I596_RS08870 | Not Available | Positive | 2189920 - 2190477 | 20401.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
