Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase family protein | I596_RS08775 | O66602 | Negative | 2169443 - 2170000 | 18141.9 |
| hypothetical protein | I596_RS08780 | Not Available | Positive | 2170464 - 2170778 | 11250.2 |
| hypothetical protein | I596_RS08785 | Not Available | Negative | 2170899 - 2171216 | 11928.3 |
| methyltransferase domain-containing protein | I596_RS08790 | Not Available | Negative | 2171421 - 2172347 | 35735.6 |
| sensor histidine kinase | I596_RS08795 | P10799 | Negative | 2172734 - 2174101 | 48826.0 |
| Trna-pro | Not Available | Not Available | Positive | 2174638 - 2174714 | Not Available |
| histidine--trna ligase | I596_RS08805 | Q8PLH2 | Positive | 2174918 - 2176285 | 50671.6 |
| histidine ammonia-lyase | I596_RS08810 | Q67JH4 | Positive | 2176447 - 2178348 | 68479.4 |
| m14 family zinc carboxypeptidase | I596_RS08815 | P18143 | Negative | 2178633 - 2180345 | 61885.0 |
| carbohydrate porin | I596_RS18755 | Not Available | Positive | 2180500 - 2180931 | 14915.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
