Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c5 family protein | I596_RS00850 | P00123 | Negative | 223432 - 223911 | 16165.5 |
| Trna-arg | Not Available | Not Available | Positive | 224232 - 224308 | Not Available |
| is3 family transposase | I596_RS00860 | Not Available | Negative | 224396 - 225495 | 42366.4 |
| transcriptional regulator domain-containing protein | I596_RS18885 | Not Available | Negative | 225556 - 225720 | 6378.65 |
| hypothetical protein | I596_RS00870 | Not Available | Negative | 225932 - 227143 | 43138.8 |
| winged helix-turn-helix domain-containing protein | I596_RS00875 | Not Available | Negative | 227267 - 229675 | 88447.5 |
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS00880 | Not Available | Positive | 229912 - 230862 | 36318.8 |
| dihydrofolate reductase family protein | I596_RS00885 | Not Available | Positive | 231738 - 232268 | 19565.3 |
| hypothetical protein | I596_RS18330 | Not Available | Negative | 232253 - 232522 | 9987.32 |
| catalase | I596_RS00890 | Q9X576 | Positive | 232599 - 234695 | 76463.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
