Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad:protein fmn transferase | I596_RS08675 | A5F5Y3 | Positive | 2145729 - 2146760 | 36882.8 |
| sulfite reductase flavoprotein subunit alpha | I596_RS08680 | Q9KUX4 | Positive | 2146769 - 2148409 | 58541.9 |
| tonb-dependent siderophore receptor | I596_RS08685 | P81549 | Positive | 2148564 - 2150942 | 85739.7 |
| fe2+-dependent dioxygenase | I596_RS08690 | B0RQK3 | Positive | 2151023 - 2151709 | 25452.3 |
| tetratricopeptide repeat protein | I596_RS08695 | Not Available | Positive | 2151702 - 2152403 | 24807.4 |
| non-heme iron oxygenase ferredoxin subunit | I596_RS08700 | P0A185 | Positive | 2152449 - 2152763 | 11456.4 |
| hypothetical protein | I596_RS08705 | Not Available | Negative | 2152776 - 2153987 | 42397.0 |
| phosphoenolpyruvate synthase | I596_RS08710 | Q02KR1 | Negative | 2154157 - 2156529 | 85589.6 |
| winged helix-turn-helix domain-containing protein | I596_RS08715 | Not Available | Positive | 2156736 - 2159129 | 85696.9 |
| lvivd repeat-containing protein | I596_RS08720 | Not Available | Positive | 2159350 - 2161947 | 91612.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
