Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly protein sufb | I596_RS08625 | Q55790 | Positive | 2137154 - 2138632 | 54131.2 |
| lysozyme inhibitor lpri family protein | I596_RS08630 | Not Available | Positive | 2138629 - 2139078 | 15582.2 |
| fe-s cluster assembly atpase sufc | I596_RS08635 | P77499 | Positive | 2139132 - 2139893 | 27639.4 |
| fe-s cluster assembly protein sufd | I596_RS08640 | P77689 | Positive | 2139893 - 2141191 | 45368.2 |
| cysteine desulfurase | I596_RS08645 | Q9PDA6 | Positive | 2141188 - 2142423 | 44571.5 |
| gnat family n-acetyltransferase | I596_RS08650 | Not Available | Positive | 2142420 - 2142977 | 20146.9 |
| transcriptional repressor | I596_RS08655 | Not Available | Positive | 2143007 - 2143441 | 15544.0 |
| pepsy-associated tm helix domain-containing protein | I596_RS08660 | Not Available | Positive | 2143619 - 2144260 | 23992.1 |
| duf2271 domain-containing protein | I596_RS08665 | Not Available | Positive | 2144274 - 2144789 | 18667.1 |
| duf4198 domain-containing protein | I596_RS08670 | Not Available | Positive | 2144848 - 2145657 | 29174.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
