Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I596_RS08575 | Not Available | Positive | 2125689 - 2129582 | 130210.0 |
| phosphoribosylglycinamide formyltransferase | I596_RS08580 | P08179 | Negative | 2129742 - 2130416 | 23163.0 |
| phosphoribosylformylglycinamidine cyclo-ligase | I596_RS08585 | Q4UX30 | Negative | 2130400 - 2131467 | 37294.2 |
| duf2066 domain-containing protein | I596_RS08590 | Not Available | Positive | 2131672 - 2132301 | 21873.5 |
| cdp-alcohol phosphatidyltransferase family protein | I596_RS08595 | Not Available | Positive | 2132311 - 2132868 | 19812.1 |
| ai-2e family transporter | I596_RS08600 | Q9ZCT3 | Positive | 2132978 - 2134162 | 42430.1 |
| dnaa regulatory inactivator hda | I596_RS08605 | O86235 | Positive | 2134159 - 2134860 | 24928.2 |
| n-acetylmuramate alpha-1-phosphate uridylyltransferase muru | I596_RS08610 | Q88QT2 | Negative | 2134864 - 2135553 | 24538.4 |
| aminoglycoside phosphotransferase family protein | I596_RS08615 | Q88QT3 | Negative | 2135568 - 2136569 | 37296.8 |
| suf system fe-s cluster assembly regulator | I596_RS08620 | Not Available | Positive | 2136684 - 2137133 | 15792.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
