Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | I596_RS08525 | Q8P8M6 | Negative | 2114323 - 2116002 | 59035.5 |
| smc-scp complex subunit scpb | I596_RS08530 | Q83CP9 | Negative | 2115999 - 2116841 | 29882.5 |
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS08535 | Q9PAP4 | Negative | 2116927 - 2117769 | 31926.9 |
| ycii family protein | I596_RS08540 | P0AB56 | Positive | 2118155 - 2118454 | 10509.6 |
| bola family transcriptional regulator | I596_RS08545 | Not Available | Positive | 2118451 - 2118735 | 10103.0 |
| peptidyl-prolyl cis-trans isomerase | I596_RS08550 | Not Available | Positive | 2118846 - 2119649 | 28967.6 |
| chromosome segregation protein smc | I596_RS08555 | Q5H054 | Positive | 2119659 - 2123162 | 129380.0 |
| cell division protein zipa | I596_RS08560 | Q9PAG1 | Positive | 2123189 - 2123944 | 27260.9 |
| duf3108 domain-containing protein | I596_RS08565 | Not Available | Negative | 2123981 - 2124688 | 25711.3 |
| hypothetical protein | I596_RS08570 | Not Available | Positive | 2125021 - 2125677 | 22730.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
