Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | I596_RS08475 | Not Available | Positive | 2101077 - 2101490 | 15046.9 |
| hypothetical protein | I596_RS08480 | Not Available | Negative | 2101504 - 2102484 | 34890.0 |
| csgg/hfab family protein | I596_RS08485 | Not Available | Negative | 2102481 - 2103254 | 27409.9 |
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS08490 | P0AAZ6 | Positive | 2103335 - 2104677 | 49032.9 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | I596_RS08495 | P39844 | Positive | 2104674 - 2106206 | 53431.8 |
| s8 family serine peptidase | I596_RS08500 | Q5JIZ5 | Negative | 2106385 - 2109729 | 113959.0 |
| serine--trna ligase | I596_RS08505 | B2FKE4 | Positive | 2109923 - 2111200 | 46483.6 |
| lysr family transcriptional regulator | I596_RS08510 | P43011 | Negative | 2111375 - 2112286 | 33695.6 |
| arsenate reductase (glutaredoxin) | I596_RS08515 | P63621 | Negative | 2112286 - 2112636 | 12596.6 |
| csgg/hfab family protein | I596_RS08520 | Not Available | Positive | 2112926 - 2113648 | 24797.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
