Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | I596_RS08425 | P76241 | Positive | 2089539 - 2090315 | 27932.8 |
| type ii toxin-antitoxin system rele/pare family toxin | I596_RS08430 | Q15T99 | Negative | 2090476 - 2090693 | 7932.71 |
| leucyl/phenylalanyl-trna--protein transferase | I596_RS08435 | B0RT37 | Negative | 2090797 - 2091528 | 26424.9 |
| gnat family n-acetyltransferase | I596_RS08440 | Not Available | Negative | 2091525 - 2092664 | 41742.5 |
| thioredoxin-disulfide reductase | I596_RS08445 | Q9KSS4 | Negative | 2092694 - 2093656 | 34178.9 |
| alanine dehydrogenase | I596_RS08450 | P9WQB1 | Positive | 2093923 - 2094984 | 36565.4 |
| dna translocase ftsk | I596_RS08455 | Q87DL2 | Positive | 2095028 - 2097349 | 83835.4 |
| outer membrane lipoprotein chaperone lola | I596_RS08460 | Q8PKZ8 | Positive | 2097441 - 2098100 | 24120.4 |
| tetratricopeptide repeat protein | I596_RS08465 | Not Available | Positive | 2098210 - 2100396 | 78828.8 |
| hypothetical protein | I596_RS08470 | Not Available | Negative | 2100413 - 2100871 | 16151.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
