Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent aminotransferase family protein | I596_RS08275 | P77730 | Negative | 2061854 - 2063278 | 52127.6 |
| nad-dependent epimerase/dehydratase family protein | I596_RS08280 | Q9SA52 | Positive | 2063583 - 2064725 | 40971.9 |
| duf349 domain-containing protein | I596_RS08285 | Not Available | Negative | 2064883 - 2067525 | 95381.4 |
| trab/gumn family protein | I596_RS08290 | Q58760 | Negative | 2067525 - 2068685 | 42012.3 |
| carbon-nitrogen hydrolase | I596_RS08295 | Q8VYF5 | Negative | 2068783 - 2069670 | 32912.0 |
| hypothetical protein | I596_RS08300 | Not Available | Negative | 2069939 - 2070775 | 30698.2 |
| tmem43 family protein | I596_RS08305 | Not Available | Negative | 2070772 - 2071428 | 23127.3 |
| duf4920 domain-containing protein | I596_RS08310 | Not Available | Negative | 2071437 - 2071961 | 17966.2 |
| mbl fold metallo-hydrolase | I596_RS08315 | O34760 | Negative | 2072012 - 2072881 | 31551.8 |
| gamma-glutamyltransferase | I596_RS08320 | P18956 | Negative | 2072893 - 2074605 | 59681.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
