Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-deoxyinosine glycosylase | I596_RS00800 | Not Available | Positive | 215417 - 215995 | 20698.0 |
| peroxiredoxin | I596_RS00805 | Q83CY8 | Positive | 216028 - 216582 | 20293.3 |
| hypothetical protein | I596_RS00810 | Not Available | Positive | 216656 - 217117 | 15377.7 |
| aquaporin z | I596_RS00815 | Q8X6K6 | Positive | 217307 - 218008 | 23438.9 |
| cell division protein zape | I596_RS00820 | P64613 | Negative | 218159 - 219268 | 41338.9 |
| alpha/beta hydrolase | I596_RS00825 | Not Available | Negative | 219300 - 219980 | 24320.2 |
| acp phosphodiesterase | I596_RS00830 | Not Available | Positive | 220048 - 220635 | 21807.3 |
| ammonium transporter | I596_RS00835 | P69680 | Negative | 220701 - 222038 | 45732.1 |
| p-ii family nitrogen regulator | I596_RS00840 | Q98N18 | Negative | 222058 - 222396 | 12055.6 |
| torf family putative porin | I596_RS00845 | Not Available | Negative | 222424 - 223176 | 27402.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
