Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-f crispr-associated endonuclease cas1f | I596_RS08140 | Q02ML7 | Positive | 2015868 - 2016842 | 35688.6 |
| type i-f crispr-associated helicase cas3f | I596_RS08145 | Q02ML8 | Positive | 2016839 - 2020219 | 126114.0 |
| type i-f crispr-associated protein csy1 | I596_RS08150 | Q02ML9 | Positive | 2020306 - 2021664 | 50825.8 |
| type i-f crispr-associated protein csy2 | I596_RS08155 | Q02MM0 | Positive | 2021661 - 2022653 | 37008.8 |
| type i-f crispr-associated protein csy3 | I596_RS08160 | Q02MM1 | Positive | 2022680 - 2023717 | 37748.6 |
| type i-f crispr-associated endoribonuclease cas6/csy4 | I596_RS08165 | Q02MM2 | Positive | 2023722 - 2024288 | 21157.5 |
| hypothetical protein | I596_RS08170 | Not Available | Positive | 2026723 - 2027079 | 13598.4 |
| bile acid:sodium symporter family protein | I596_RS08175 | Q8ZKL0 | Positive | 2027340 - 2028197 | 30288.7 |
| xac0095 family protein | I596_RS08180 | Not Available | Positive | 2028391 - 2028669 | 9832.6 |
| hypothetical protein | I596_RS08185 | Not Available | Negative | 2028851 - 2029474 | 22156.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
