Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2063 domain-containing protein | I596_RS08090 | Not Available | Negative | 2004596 - 2005363 | 27928.5 |
| duf692 domain-containing protein | I596_RS08095 | Q02QB5 | Negative | 2005356 - 2006219 | 31253.2 |
| hypothetical protein | I596_RS08100 | Not Available | Negative | 2006227 - 2006613 | 12913.2 |
| opro/oprp family phosphate-selective porin | I596_RS08105 | Not Available | Positive | 2006937 - 2008064 | 41533.4 |
| dna gyrase subunit a | I596_RS08110 | P41513 | Positive | 2008427 - 2011030 | 95563.2 |
| alcohol dehydrogenase adhp | I596_RS08115 | Q8GIX7 | Negative | 2011076 - 2012104 | 35525.0 |
| helix-turn-helix transcriptional regulator | I596_RS08120 | Not Available | Positive | 2012381 - 2012854 | 16732.3 |
| type ii toxin-antitoxin system hipa family toxin | I596_RS08125 | Not Available | Positive | 2012851 - 2014125 | 46812.3 |
| duf922 domain-containing zn-dependent protease | I596_RS08130 | Not Available | Positive | 2014191 - 2014745 | 21089.6 |
| hypothetical protein | I596_RS08135 | Not Available | Positive | 2014904 - 2015422 | 18951.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
