Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | I596_RS08040 | Q8PAG5 | Positive | 1995810 - 1996550 | 26188.4 |
| trans-aconitate 2-methyltransferase | I596_RS08045 | Not Available | Negative | 1996576 - 1997664 | 41787.8 |
| cysteine synthase a | I596_RS08050 | D2Z027 | Negative | 1997748 - 1998701 | 33926.9 |
| phosphate signaling complex protein phou | I596_RS08055 | Q9PBJ9 | Negative | 1998778 - 1999506 | 26770.2 |
| phosphate abc transporter atp-binding protein pstb | I596_RS08060 | Q4UT63 | Negative | 1999517 - 2000260 | 27575.5 |
| phosphate abc transporter permease psta | I596_RS08065 | Q87C89 | Negative | 2000334 - 2001221 | 31638.6 |
| phosphate abc transporter permease subunit pstc | I596_RS08070 | Q9PBK2 | Negative | 2001218 - 2002192 | 35147.7 |
| phosphate abc transporter substrate-binding protein psts | I596_RS08075 | Q9PBK3 | Negative | 2002330 - 2003349 | 35659.4 |
| fmdb family zinc ribbon protein | I596_RS08080 | Not Available | Negative | 2003585 - 2003872 | 10016.0 |
| ribonuclease t | I596_RS08085 | Q3BV71 | Negative | 2003904 - 2004551 | 23731.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
