Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat-inducible transcriptional repressor hrca | I596_RS07990 | Q8PAL1 | Positive | 1983271 - 1984326 | 38617.5 |
| nucleotide exchange factor grpe | I596_RS07995 | Q8PMB1 | Positive | 1984396 - 1984938 | 19683.3 |
| molecular chaperone dnak | I596_RS08000 | Q2P459 | Positive | 1985189 - 1987108 | 68658.3 |
| molecular chaperone dnaj | I596_RS08005 | B0U3J7 | Positive | 1987193 - 1988314 | 40507.7 |
| 4-hydroxy-tetrahydrodipicolinate reductase | I596_RS08010 | Q0A7E5 | Positive | 1988412 - 1989212 | 27286.6 |
| ntp/ndp exchange transporter | I596_RS08015 | Not Available | Negative | 1989235 - 1990551 | 47272.6 |
| aldo/keto reductase | I596_RS08020 | Not Available | Negative | 1990736 - 1991656 | 32398.0 |
| manganese efflux pump mntp family protein | I596_RS08025 | Q4UP19 | Positive | 1992002 - 1992583 | 19538.4 |
| ribonuclease r | I596_RS08030 | P21499 | Positive | 1992828 - 1995122 | 84545.3 |
| duf1579 domain-containing protein | I596_RS08035 | Not Available | Positive | 1995151 - 1995651 | 17911.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
